Martínez-Bartolomé S, Navarro P, Martín-Maroto F, López-Ferrer D, Ramos-Fernández A, Villar M, García-Ruiz JP, Vázquez J. 2008.
"Properties of average score distributions of SEQUEST: the probability ratio method.". Mol Cell Proteomics. 2008 Jun;7(6):1135-45.

Yanes, O., F. X. Aviles, R. Wenzel, A. Nazabal, R. Zenobi, and J. J. Calvete.
2007.
"Proteomic profiling of a snake venom using high mass detection MALDI-TOF mass spectrometry". J Am Soc Mass Spectrom 18:600-6.

Verdeguer, F., C. Castro, M. Kubicek, D. Pla, M. Vila-Caballer, A. Vinue, F. Civeira, M. Pocovi, J. J. Calvete, and V. Andres. 2007.
"Complement regulation in murine and human hypercholesterolemia and role in the control of macrophage and smooth muscle cell proliferation." Cardiovasc Res 76:340-50.

Sentandreu, M. A., M. Armenteros, J. J. Calvete, A. Ouali, M. C. Aristoy, and F. Toldra. 2007.
"Proteomic identification of actin-derived oligopeptides in dry-cured ham." J Agric Food Chem 55:3613-9.

Polenta, G. A., J. J. Calvete, and C. B. Gonzalez. 2007.
"Isolation and characterization of the main small heat shock proteins induced in tomato pericarp by thermal treatment." Febs J 274:6447-55.

Calvete, J. J., C. Marcinkiewicz, and L. Sanz. 2007.
"Snake venomics of Bitis gabonica gabonica. Protein family composition, subunit organization of venom toxins, and characterization of dimeric disintegrins bitisgabonin-1 and bitisgabonin-2." J Proteome Res 6:326-36.

Calvete, J. J., P. Juarez, and L. Sanz. 2007.
"Snake venomics. Strategy and applications". J Mass Spectrom 42:1405-14.

Calvete, J. J., J. Escolano, and L. Sanz. 2007.
"Snake venomics of Bitis species reveals large intragenus venom toxin composition variation: application to taxonomy of congeneric taxa". J Proteome Res 6:2732-45.

Sanz, L., H. L. Gibbs, S. P. Mackessy, and J. J. Calvete. 2006.
"Venom proteomes of closely related Sistrurus rattlesnakes with divergent diets." J Proteome Res 5:2098-112.

Calvete, J. J., F. Revert, M. Blanco, J. Cervera, C. Tarrega, L. Sanz, F. Revert-Ros, F. Granero, E. Perez-Paya, B. G. Hudson, and J. Saus. 2006.
"Conformational diversity of the Goodpasture antigen, the noncollagenous-1 domain of the alpha3 chain of collagen IV." Proteomics 6 Suppl 1:S237-44.

Arolas, J. L., S. Bronsoms, S. Ventura, F. X. Aviles, and J. J. Calvete. 2006.
"Characterizing the tick carboxypeptidase inhibitor: molecular basis for its two-domain nature." J Biol Chem 281:22906-16.

Ramos-Fernandez, A., D. Lopez-Ferrer, and J. Vazquez. 2007.
"Improved method for differential expression proteomics using trypsin-catalyzed 18O labeling with a correction for labeling efficiency." Mol Cell Proteomics 6:1274-86.

M. Carrera, B. Cañas, C. Piñeiro, J. Vázquez, J.M. Gallardo
"De novo mass spectrometry sequencing and characterization of species-specific peptides from nucleoside diphosphate kinase B (NDK B) for the classification of commercial fish species belonging to the family Merlucciidae"
J. Proteome Res. 6:3070-80.

M. Carrera, B. Cañas, C. Piñeiro, J. Vázquez, J. M.Gallardo
"Identification of commercial hake and grenadier species by proteomic analysis of the parvalbumin fraction 2"
Proteomics 6, 5278-5287 (2006)

Paula Álvarez-Chaver, Ana M. Rodríguez-Piñeiro, Francisco J. Rodríguez-Berrocal, Vicenta S. Martínez-Zorzano and María Páez de la Cadena
"Identification of hydrophobic proteins as biomarker candidates for colorectal cancer"
Int J Biochem Cell Biol. 2007;39(3):529-40. Epub 2006 Oct 7

Daniel. López-Ferrer, Antonio Ramos-Fernández, Salvador Martínez-Bartolomé , Predestinación García Ruiz and J. Vázquez
“ Quantitative proteomics using (16)O/(18)O labeling and linear ion trap mass spectrometry."
Proteomics. 2006 Apr;6 Suppl 1:S4-S11.
PMID: 16534745 [PubMed - in process]